CDS

Accession Number TCMCG016C28217
gbkey CDS
Protein Id OMO51283.1
Location complement(join(36740..36859,36970..37044,37148..37291,37452..37533,37632..37714,37880..37984,38094..38132,38301..38357,38933..39001,39221..39331,40011..40087,40181..40373))
Organism Corchorus capsularis
locus_tag CCACVL1_29887

Protein

Length 384aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015873.1
Definition Ribosomal RNA assembly KRR1 [Corchorus capsularis]
Locus_tag CCACVL1_29887

EGGNOG-MAPPER Annotation

COG_category A
Description Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K06961        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGAGCTGGATAATGTGGAAGAAGTGAATTTGCAACAGAAGAAGAAGCATAAAGGAAAACACGACAAGCCAAAGCCATGGGACGAAGACCCAAATATTGACCGTTGGAAGATTGAGAAGTTTGACCCTTCTTGGAACCCTGATGGGTTGCTCGAAGTCAGCTCCTTCTCCACTATTTTCCCCCGGTATCGAGAACAATACTTGCAAGAGGCTTGGCCAAAGGTTAAATCTGCTTTGAAAGAATATGGTATTGCTGCTGAGCTCAACTTGGTTGAAGGGTCCATGACTGTTTCAACTACAAGAAAAACTAGGGACCCATATATAATCATGAAAGCCAGAGATCTAATCAAGCTTCTATCAAGAAGTGTTCCTGCACCTCAGGCAATCAAAATTCTGGATGACGAAATGCAATGTGACATTATCAAAATTGGAAACTTGGTGCACAAAAAGGAACGGTTTGTTAAAAGAAGGCAGCGTCTTGTGGGGCCAAATTCTTCGACTTTGAAGGCACTTGAAATATTGACAGGCTGCTACATTCTTGTTCAGGGAAACACTGTTGCTGCTATGGGTTCATTCAAAGGTTTAAAACAACTCCGAAGGATTGTGGAAGACTGCATAGAGAATAGAATGCATCCTGTATACCATATCAAGATTCTGATGATGAAGAAAGAACTTGAGAAGGATCCATCACTTAAAAATGAAAACTGGGACAGGTTTCTTCCAAAGTTTAAGAAGAAAAATGTTAAGACAAAGAAGGTTAAGAGCAAGGAGAAGAAACCATATACACCCTTCCCTCCTCCTCAACCACCTAGCAAGATTGATCAACAATTGGAATCTGGAGAGTACTTCTTGAGTGAGAAAAAGAAATTAGCTAAGAAATGGGAAGAGAAGCAGGAGAAGCAGGCACAGAAAACAGCAGAAAACAAGAGAAAAAGAGAAGAAGCATTTGTTCCTCCCAAGGAACCCGTCAATCAAGATTCTAACAAGTCAGAGAATGACAAGGAAGATGTTGCTGCGCTTGCCAAGTCCGTGAAGCAAAAGGCCAAGGAGTTTGGGAAGCAAAAATCTTTAGAAAATATCAATGCAGAAGAATATATTGAAGCCCCTGCTGGAGAACGACCTTCAAAAAAGAAAAAGAAATCCAAGCATACTTAG
Protein:  
MELDNVEEVNLQQKKKHKGKHDKPKPWDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREQYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYIIMKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVHKKERFVKRRQRLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQLRRIVEDCIENRMHPVYHIKILMMKKELEKDPSLKNENWDRFLPKFKKKNVKTKKVKSKEKKPYTPFPPPQPPSKIDQQLESGEYFLSEKKKLAKKWEEKQEKQAQKTAENKRKREEAFVPPKEPVNQDSNKSENDKEDVAALAKSVKQKAKEFGKQKSLENINAEEYIEAPAGERPSKKKKKSKHT